docker中使用GPU+rocksdb的詳細教程
配置環(huán)境
dell@dell-Precision-3630-Tower ~ lsb_release -a No LSB modules are available. Distributor ID: Ubuntu Description: Ubuntu 20.04.6 LTS Release: 20.04 Codename: focal dell@dell-Precision-3630-Tower ~ nvcc --version nvcc: NVIDIA (R) Cuda compiler driver Copyright (c) 2005-2022 NVIDIA Corporation Built on Wed_Sep_21_10:33:58_PDT_2022 Cuda compilation tools, release 11.8, V11.8.89 Build cuda_11.8.r11.8/compiler.31833905_0 dell@dell-Precision-3630-Tower ~ docker version Client: Docker Engine - Community Version: 24.0.6 API version: 1.43 Go version: go1.20.7 OS/Arch: linux/amd64 Context: default Server: Docker Engine - Community Engine: Version: 24.0.6 API version: 1.43 (minimum version 1.12) Go version: go1.20.7 OS/Arch: linux/amd64 Experimental: false containerd: Version: 1.6.24 runc: Version: 1.1.9 docker-init: Version: 0.19.0 #安裝方式:sudo apt-get install libcudnn8-dev=8.9.2.26-1+cuda11.8 cudnn:libcudnn8-dev=8.9.2.26-1+cuda11.8
目錄結(jié)構(gòu)

nvidia-docker和從docker 19開始提供的nvidia-container-toolkit的區(qū)別:
nvidia-docker 概述:
nvidia-docker是最初用于在 Docker 容器中提供 GPU 支持的工具。- 命令:
nvidia-docker具有自己的命令行工具,并且最初被設(shè)計為docker命令的替代品。你可以用nvidia-docker run來啟動一個使用 GPU 的容器。 - 插件:
nvidia-docker版本 1 和 2 都使用了 Docker 插件系統(tǒng)。版本 2 是 Docker 插件的一種形式,允許用戶使用--runtime=nvidia標志與標準docker命令一起使用。
nvidia-container-toolkit
- 概述:在 Docker 19.03 版本之后,Docker 引入了一個名為 GPU 的設(shè)備請求特性。
nvidia-container-toolkit是一個新的工具,允許用戶使用這個新特性,而不再需要nvidia-docker的自定義運行時。 - 命令:與使用
nvidia-docker不同,使用nvidia-container-toolkit,你可以使用常規(guī)的docker命令,但是添加一個--gpus參數(shù)來啟用 GPU 支持。例如:docker run --gpus all nvidia/cuda:10.0-base nvidia-smi。 - 集成:它更緊密地集成到 Docker CLI 中,允許更好的兼容性和使用體驗。
比較和推薦使用
nvidia-docker版本 1 已經(jīng)棄用,而版本 2 在某些用例中仍然被使用,但逐漸被nvidia-container-toolkit替代。- 對于 Docker 19.03 及更高版本,官方推薦使用
nvidia-container-toolkit,因為它提供了一個更簡潔和標準的方式來在容器中使用 GPU。 - 使用
nvidia-container-toolkit允許開發(fā)者和運維團隊在不更改工作流的情況下,簡單地將 GPU 支持添加到他們現(xiàn)有的 Docker 容器中。 - 盡管在一些老的代碼和項目中你仍然可能會看到
nvidia-docker的使用,但新的項目和開發(fā)通常應(yīng)該使用nvidia-container-toolkit,除非有明確的理由不這樣做。
docker安裝GPU工具箱nvidia-container-toolkit
參考鏈接:
https://zhuanlan.zhihu.com/p/544713249
sudo apt install curl distribution=$(. /etc/os-release;echo $ID$VERSION_ID) curl -s -L https://nvidia.github.io/nvidia-docker/gpgkey | sudo apt-key add - curl -s -L https://nvidia.github.io/nvidia-docker/$distribution/nvidia-docker.list | sudo tee /etc/apt/sources.list.d/nvidia-docker.list sudo apt-get update && sudo apt-get install -y nvidia-container-toolkit sudo systemctl restart docker
docker拉取含cuda的鏡像建立鏡像
去Nvidia官網(wǎng)下載cuda版本的Docker:https://hub.docker.com/r/nvidia/cuda
images包含的三種風格:
base: Includes the CUDA runtime (cudart)runtime: Builds on thebaseand includes the CUDA math libraries, and NCCL. Aruntimeimage that also includes cuDNN is available.devel: Builds on theruntimeand includes headers, development tools for building CUDA images. These images are particularly useful for multi-stage builds.
NVIDIA Container Toolkit
The NVIDIA Container Toolkit for Docker is required to run CUDA images.
For CUDA 10.0, nvidia-docker2 (v2.1.0) or greater is recommended. It is also recommended to use Docker 19.03.
還是自己寫一個鏡像吧,該鏡像擁有cudn,rocksdb環(huán)境
# from official ubuntu 20.04
# FROM ubuntu:20.04
# docker pull nvidia/cuda:11.8.0-devel-ubuntu20.04
FROM nvidia/cuda:11.8.0-devel-ubuntu20.04
# RUN mv /etc/apt/sources.list /etc/apt/sources_backup.list && \
# echo "deb http://mirrors.ustc.edu.cn/ubuntu/ focal main restricted " >> /etc/apt/sources.list && \
# echo "deb http://mirrors.ustc.edu.cn/ubuntu/ focal-updates main restricted " >> /etc/apt/sources.list && \
# echo "deb http://mirrors.ustc.edu.cn/ubuntu/ focal universe " >> /etc/apt/sources.list && \
# echo "deb http://mirrors.ustc.edu.cn/ubuntu/ focal-updates universe " >> /etc/apt/sources.list && \
# echo "deb http://mirrors.ustc.edu.cn/ubuntu/ focal multiverse " >> /etc/apt/sources.list && \
# echo "deb http://mirrors.ustc.edu.cn/ubuntu/ focal-updates multiverse " >> /etc/apt/sources.list && \
# echo "deb http://mirrors.ustc.edu.cn/ubuntu/ focal-backports main restricted universe multiverse " >> /etc/apt/sources.list && \
# echo "deb http://mirrors.ustc.edu.cn/ubuntu/ focal-security main restricted " >> /etc/apt/sources.list && \
# echo "deb http://mirrors.ustc.edu.cn/ubuntu/ focal-security universe " >> /etc/apt/sources.list && \
# echo "deb http://mirrors.ustc.edu.cn/ubuntu/ focal-security multiverse " >> /etc/apt/sources.list && \
# echo "deb http://archive.canonical.com/ubuntu focal partner " >> /etc/apt/sources.list
# update system
RUN ln -sf /usr/share/zoneinfo/Asia/Shanghai /etc/localtime && echo 'Asia/Shanghai' >/etc/timezone \
&& apt-key adv --fetch-keys https://developer.download.nvidia.com/compute/cuda/repos/ubuntu2004/x86_64/3bf863cc.pub \
&& apt clean && apt update && apt install -yq --no-install-recommends sudo \
&& sudo apt install -yq --no-install-recommends python3 python3-pip libgl1-mesa-glx libglib2.0-0 libsm6 libxext6 libxrender-dev openssh-server \
&& sudo pip3 install --upgrade pip \
&& sudo pip3 config set global.index-url https://mirrors.aliyun.com/pypi/simple \
&& sudo pip3 install setuptools
RUN apt-get update && apt-get upgrade -y
# install basic tools
RUN apt-get install -y vim wget curl
# install tzdata noninteractive
RUN DEBIAN_FRONTEND=noninteractive TZ=Etc/UTC apt-get -y install tzdata
# install git and default compilers
RUN apt-get install -y git gcc g++ clang clang-tools
# install basic package
RUN apt-get install -y lsb-release software-properties-common gnupg
# install gflags, tbb
RUN apt-get install -y libgflags-dev libtbb-dev
# install compression libs
RUN apt-get install -y libsnappy-dev zlib1g-dev libbz2-dev liblz4-dev libzstd-dev
# install cmake
RUN apt-get install -y cmake
RUN apt-get install -y libssl-dev
# install clang-13
WORKDIR /root
RUN wget https://apt.llvm.org/llvm.sh
RUN chmod +x llvm.sh
RUN ./llvm.sh 13 all
# install gcc-7, 8, 10, 11, default is 9
RUN apt-get install -y gcc-7 g++-7
RUN apt-get install -y gcc-8 g++-8
RUN apt-get install -y gcc-10 g++-10
RUN echo "deb https://ppa.launchpadcontent.net/ubuntu-toolchain-r/test/ubuntu focal main" |tee -a /etc/apt/sources.list
RUN echo "deb-src https://ppa.launchpadcontent.net/ubuntu-toolchain-r/test/ubuntu focal main" |tee -a /etc/apt/sources.list
RUN curl -sL "http://keyserver.ubuntu.com/pks/lookup?op=get&search=0x60C317803A41BA51845E371A1E9377A2BA9EF27F" |apt-key add
#RUN apt-key adv --keyserver keyserver.ubuntu.com --recv-keys 60C317803A41BA51845E371A1E9377A2BA9EF27F
RUN add-apt-repository -y ppa:ubuntu-toolchain-r/test
RUN apt-get update && apt-get upgrade -y
#RUN apt-get install -y gcc-11 g++-11
# install apt-get install -y valgrind
RUN apt-get install -y valgrind
# install folly depencencies
RUN apt-get install -y libgoogle-glog-dev
# install openjdk 8
RUN apt-get install -y openjdk-8-jdk
ENV JAVA_HOME /usr/lib/jvm/java-1.8.0-openjdk-amd64
# install mingw
RUN apt-get install -y mingw-w64
# install gtest-parallel package
RUN git clone --single-branch --branch master --depth 1 https://github.com/google/gtest-parallel.git ~/gtest-parallel
ENV PATH $PATH:/root/gtest-parallel
# install libprotobuf for fuzzers test
RUN apt-get install -y ninja-build binutils liblzma-dev libz-dev pkg-config autoconf libtool
#解決GnuTLS recv error
RUN apt-get update
RUN apt-get upgrade
RUN apt-get install --reinstall ca-certificates
RUN git clone --branch v1.0 https://github.com/google/libprotobuf-mutator.git ~/libprotobuf-mutator && cd ~/libprotobuf-mutator && git checkout ffd86a32874e5c08a143019aad1aaf0907294c9f && mkdir build && cd build && cmake .. -GNinja -DCMAKE_C_COMPILER=clang-13 -DCMAKE_CXX_COMPILER=clang++-13 -DCMAKE_BUILD_TYPE=Release -DLIB_PROTO_MUTATOR_DOWNLOAD_PROTOBUF=ON && ninja && ninja install
ENV PKG_CONFIG_PATH /usr/local/OFF/:/root/libprotobuf-mutator/build/external.protobuf/lib/pkgconfig/
ENV PROTOC_BIN /root/libprotobuf-mutator/build/external.protobuf/bin/protoc
#install the latest google benchmark
RUN git clone --depth 1 --branch v1.7.0 https://github.com/google/benchmark.git ~/benchmark
RUN cd ~/benchmark && mkdir build && cd build && cmake .. -GNinja -DCMAKE_BUILD_TYPE=Release -DBENCHMARK_ENABLE_GTEST_TESTS=0 && ninja && ninja install
# # clean up
# RUN rm -rf /var/lib/apt/lists/*
# RUN rm -rf /root/benchmark#以下為build-image.sh
#!/usr/bin/env bash
SHELL_HOME=$(
cd "$(dirname "$0")" || exit
pwd
)
source "${SHELL_HOME}/../dev.conf"
# docker build --build-arg \
# --build-arg http_proxy= xxx\
# --build-arg https_proxy= xxx\
# --build-arg all_proxy=socks5 \
# --tag "${IMAGE_NAME}:${IMAGE_VERSION}" "${SHELL_HOME}"
docker build --tag "${IMAGE_NAME}:${IMAGE_VERSION}" "${SHELL_HOME}"運行容器
參考鏈接:https://blog.csdn.net/Maid_Li/article/details/124952650
在啟動docker容器的時候要注意加一些cuda的參數(shù)
--gpus all和-e NVIDIA_VISIBLE_DEVICES=all選擇這個容器可見的顯卡,直接全部就完事了-e NVIDIA_DRIVER_CAPABILITIES=compute,utility配置了一些cuda必備的包如nvidia-smi之類的- 以下為start.sh
#!/usr/bin/env bash
#當前腳本路徑
SHELL_HOME=$(
cd "$(dirname "$0")" || exit
pwd
)
source "${SHELL_HOME}"/../dev.conf
source "${SHELL_HOME}"/utilities/rocks.conf
CONTAINER_NAME="rocksdb-gpu"
# work dir inside the dev container
SOURCE_DIR_INSIDE="/home/baum/GPU_ROCKS"
#本地源代碼目錄
SOURCE_DIR="/nvme/baum/git-project/GPU_ROCKS"
WORK_DIR=/rocks
RECREATE_CONTAINER=""
#我執(zhí)行的./start.sh -s /nvme/baum/git-project/GPU_ROCKS
function show_usage() {
echo "
Start a gdb container for Rocksdb.
Usage:
./start.sh
./start.sh -s /path/to/your/cockroachdb/home
Options:
-s Project path of crdb, default is '${HOME}/go/src/github.com/cockroachdb'.
-r Recreate the dev container.
-h Show this message.
"
exit
}
while getopts "s:hr" opt; do
case $opt in
s)
SOURCE_DIR=${OPTARG}
;;
r)
RECREATE_CONTAINER="true"
;;
h)
show_usage
;;
*)
show_usage
;;
esac
done
CONTAINER_RUNNING=$(docker container ls | grep "${CONTAINER_NAME}")
CONTAINER_EXISTED=$(docker container ls -a | grep "${CONTAINER_NAME}")
if [[ ${RECREATE_CONTAINER} == "true" && -n ${CONTAINER_EXISTED} ]]; then
echo "remove the existing rocksdb-gpu container ..."
docker rm -f "${CONTAINER_NAME}"
CONTAINER_EXISTED=""
fi
echo "current SOURCE_DIR is '${SOURCE_DIR}'"
if [[ -z ${CONTAINER_EXISTED} ]]; then
echo "staring the rocksdb-gpu environment 1 ..."
#-v 掛載目錄,將前一個映射到后一個
docker run -it -v "${SOURCE_DIR}":/rocks \
-v "${SOURCE_DIR}":${SOURCE_DIR_INSIDE} \
--name ${CONTAINER_NAME} \
--publish "${ROCKS_PORT}"-"${GDB_PORT}":"${ROCKS_PORT}"-"${GDB_PORT}" \
--network=rocksdb-br \
--gpus all \
-e NVIDIA_DRIVER_CAPABILITIES=compute,utility \
-e NVIDIA_VISIBLE_DEVICES=all \
--workdir ${WORK_DIR} \
"${IMAGE_NAME}:${IMAGE_VERSION}" \
bash
exit
fi
if [[ -z ${CONTAINER_RUNNING} ]]; then
echo "starting rocksdb-gpu environment 2 ..."
docker start "${CONTAINER_NAME}"
fi
echo "logging into rocksdb-gpu environment '${CONTAINER_NAME}' ..."
docker exec -it "${CONTAINER_NAME}" bash網(wǎng)絡(luò)配置
本地16017-16019映射到容器16017-16019
#init-docker-network.sh
#!/usr/bin/env bash
SHELL_HOME=$(
cd "$(dirname "$0")" || exit
pwd
)
source "${SHELL_HOME}"/dev.conf
echo "create network bridge for rocks ..."
docker network create --subnet="${SUBNET}" "${BRIDGE_NAME}"
docker network list參考鏈接:
https://zhuanlan.zhihu.com/p/544713249
到此這篇關(guān)于docker中使用GPU+rocksdb的文章就介紹到這了,更多相關(guān)docker使用GPU內(nèi)容請搜索腳本之家以前的文章或繼續(xù)瀏覽下面的相關(guān)文章希望大家以后多多支持腳本之家!
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